PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1071s0008.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 199aa    MW: 21779.8 Da    PI: 5.1065
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1071s0008.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-181262155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         + y+GVr +  +g+Wv+eIr p++   ++r++lg+f t+e+Aa+a++ a+++++g
  Kalax.1071s0008.1.p 12 PVYRGVRMRN-WGKWVSEIRQPRK---KTRIWLGTFPTPEMAARAHDVAALSIKG 62
                         68*****998.**********843...6***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.2E-131262IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-321371IPR001471AP2/ERF domain
SuperFamilySSF541713.2E-221371IPR016177DNA-binding domain
SMARTSM003807.9E-361376IPR001471AP2/ERF domain
PROSITE profilePS5103223.4991370IPR001471AP2/ERF domain
CDDcd000183.21E-331472No hitNo description
PRINTSPR003671.4E-101425IPR001471AP2/ERF domain
PRINTSPR003671.4E-103652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MVVAVGGRDK HPVYRGVRMR NWGKWVSEIR QPRKKTRIWL GTFPTPEMAA RAHDVAALSI  60
KGKNAILNFP DLVSSLPRPA SSSPRDVQEA AAKAAAMENL GVSEVGLSEE ASDELSEIVE  120
LPSLDACWDD SAESSRNEFV FVEECGWLYT PPWLQSVEEC GGITVGSTPC FPMRDAPPSE  180
NRSPSLCVRV RCIYCLVT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A3e-16875268ATERF1
2gcc_A3e-16875268ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006450687.13e-64hypothetical protein CICLE_v10009370mg
RefseqXP_006476039.13e-64PREDICTED: dehydration-responsive element-binding protein 3
SwissprotQ9LYD32e-63DREB3_ARATH; Dehydration-responsive element-binding protein 3
TrEMBLA0A067GWX23e-64A0A067GWX2_CITSI; Uncharacterized protein
TrEMBLV4UCZ53e-64V4UCZ5_9R
STRINGVIT_04s0008g03400.t019e-63(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-53ERF family protein